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BMCBI
2008
149views more  BMCBI 2008»
13 years 6 months ago
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
Background: Automated extraction of protein-protein interactions (PPI) is an important and widely studied task in biomedical text mining. We propose a graph kernel based approach ...
Antti Airola, Sampo Pyysalo, Jari Björne, Tap...
BMCBI
2008
132views more  BMCBI 2008»
13 years 6 months ago
The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes thr
Background: Data mining in large DNA sequences is a major challenge in microbial genomics and bioinformatics. Oligonucleotide usage (OU) patterns provide a wealth of information f...
Hamilton Ganesan, Anna S. Rakitianskaia, Colin F. ...
CORR
2010
Springer
206views Education» more  CORR 2010»
13 years 6 months ago
Detecting Anomalous Process Behaviour using Second Generation Artificial Immune Systems
Abstract. Artificial immune systems (AISs) are problem-solving systems inspired by the biological immune system. They have been successfully applied to a number of problem domains ...
Jamie Twycross, Uwe Aickelin, Amanda M. Whitbrook
BMCBI
2006
95views more  BMCBI 2006»
13 years 6 months ago
A quantitative analysis of secondary RNA structure using domination based parameters on trees
Background: It has become increasingly apparent that a comprehensive database of RNA motifs is essential in order to achieve new goals in genomic and proteomic research. Secondary...
Teresa W. Haynes, Debra J. Knisley, Edith Seier, Y...
BMCBI
2006
147views more  BMCBI 2006»
13 years 6 months ago
QPath: a method for querying pathways in a protein-protein interaction network
Background: Sequence comparison is one of the most prominent tools in biological research, and is instrumental in studying gene function and evolution. The rapid development of hi...
Tomer Shlomi, Daniel Segal, Eytan Ruppin, Roded Sh...
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