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» Semantic Mining and Analysis of Gene Expression Data
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SDM
2008
SIAM
123views Data Mining» more  SDM 2008»
13 years 10 months ago
Constrained Co-clustering of Gene Expression Data
In many applications, the expert interpretation of coclustering is easier than for mono-dimensional clustering. Co-clustering aims at computing a bi-partition that is a collection...
Ruggero G. Pensa, Jean-François Boulicaut
BMCBI
2007
144views more  BMCBI 2007»
13 years 8 months ago
Spectral estimation in unevenly sampled space of periodically expressed microarray time series data
Background: Periodogram analysis of time-series is widespread in biology. A new challenge for analyzing the microarray time series data is to identify genes that are periodically ...
Alan Wee-Chung Liew, Jun Xian, Shuanhu Wu, David K...
ICDE
2008
IEEE
195views Database» more  ICDE 2008»
14 years 10 months ago
Scalable Rule-Based Gene Expression Data Classification
Abstract-- Current state-of-the-art association rule-based classifiers for gene expression data operate in two phases: (i) Association rule mining from training data followed by (i...
Mark A. Iwen, Willis Lang, Jignesh M. Patel
FLAIRS
2004
13 years 10 months ago
Gene Expression Data Classification with Revised Kernel Partial Least Squares Algorithm
One important feature of the gene expression data is that the number of genes M far exceeds the number of samples N. Standard statistical methods do not work well when N < M. D...
ZhenQiu Liu, Dechang Chen
ICDE
2006
IEEE
167views Database» more  ICDE 2006»
14 years 10 months ago
Mining Shifting-and-Scaling Co-Regulation Patterns on Gene Expression Profiles
In this paper, we propose a new model for coherent clustering of gene expression data called reg-cluster. The proposed model allows (1) the expression profiles of genes in a clust...
Xin Xu, Ying Lu, Anthony K. H. Tung, Wei Wang 0010