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CONSTRAINTS
2008
121views more  CONSTRAINTS 2008»
13 years 7 months ago
Modeling Biological Networks by Action Languages via Answer Set Programming
We describe an approach to modeling biological networks by action languages via answer set programming. To this end, we propose an action language for modeling biological networks...
Steve Dworschak, Susanne Grell, Victoria J. Nikifo...

Publication
295views
12 years 5 months ago
The Age of Analog Networks.
A large class of systems of biological and technological relevance can be described as analog networks, that is, collections of dynamic devices interconnected by links of varying s...
Claudio Mattiussi, Daniel Marbach, Peter Dürr, Da...
WABI
2007
Springer
109views Bioinformatics» more  WABI 2007»
14 years 1 months ago
A Novel Method for Signal Transduction Network Inference from Indirect Experimental Evidence
In this paper we introduce a new method of combined synthesis and inference of biological signal transduction networks. A main idea of our method lies in representing observed cau...
Réka Albert, Bhaskar DasGupta, Riccardo Don...
EVOW
2007
Springer
14 years 1 months ago
Modeling the Shoot Apical Meristem in A. thaliana : Parameter Estimation for Spatial Pattern Formation
Understanding the self-regulatory mechanisms controlling the spatial and temporal structure of multicellular organisms represents one of the major challenges in molecular biology. ...
Tim Hohm, Eckart Zitzler
ICFCA
2007
Springer
13 years 11 months ago
A New and Useful Syntactic Restriction on Rule Semantics for Tabular Datasets
Different rule semantics have been successively defined in many contexts such as implications in artificial intelligence, functional dependencies in databases or association rules...
Marie Agier, Jean-Marc Petit