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» Semantics of Biological Regulatory Networks
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EDBTW
2006
Springer
13 years 11 months ago
Enhanced Regular Path Queries on Semistructured Databases
Regular path queries are the basic navigational component of virtually all the mechanisms for querying semistructured data commonly found in information integration applications, W...
Dan C. Stefanescu, Alex Thomo
BMCBI
2006
180views more  BMCBI 2006»
13 years 7 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
ISNN
2007
Springer
14 years 1 months ago
A Connectionist Thematic Grid Predictor for Pre-parsed Natural Language Sentences
Abstract. Inspired on psycholinguistics and neuroscience, a symbolicconnectionist hybrid system called θ-Pred (Thematic Predictor for natural language) is proposed, designed to re...
João Luís Garcia Rosa
DASFAA
2009
IEEE
173views Database» more  DASFAA 2009»
13 years 11 months ago
A Uniform Framework for Ad-Hoc Indexes to Answer Reachability Queries on Large Graphs
Graph-structured databases and related problems such as reachability query processing have been increasingly relevant to many applications such as XML databases, biological databas...
Linhong Zhu, Byron Choi, Bingsheng He, Jeffrey Xu ...
BMCBI
2008
100views more  BMCBI 2008»
13 years 7 months ago
Extracting unrecognized gene relationships from the biomedical literature via matrix factorizations
Background: The construction of literature-based networks of gene-gene interactions is one of the most important applications of text mining in bioinformatics. Extracting potentia...
Hyunsoo Kim, Haesun Park, Barry L. Drake