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» Separating Complexity Classes Using Structural Properties
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BMCBI
2010
107views more  BMCBI 2010»
13 years 5 months ago
Interaction prediction and classification of PDZ domains
Background: PDZ domain is a well-conserved, structural protein domain found in hundreds of signaling proteins that are otherwise unrelated. PDZ domains can bind to the C-terminal ...
Sibel Kalyoncu, Ozlem Keskin, Attila Gürsoy
CONCUR
1997
Springer
14 years 2 months ago
Reachability Analysis of Pushdown Automata: Application to Model-Checking
We apply the symbolic analysis principle to pushdown systems. We represent (possibly in nite) sets of con gurations of such systems by means of nite-state automata. In order to re...
Ahmed Bouajjani, Javier Esparza, Oded Maler
ICML
2007
IEEE
14 years 11 months ago
Gradient boosting for kernelized output spaces
A general framework is proposed for gradient boosting in supervised learning problems where the loss function is defined using a kernel over the output space. It extends boosting ...
Florence d'Alché-Buc, Louis Wehenkel, Pierr...
EUROCRYPT
2003
Springer
14 years 3 months ago
On the Security of RDSA
A variant of Schnorr’s signature scheme called RDSA has been proposed by I. Biehl, J. Buchmann, S. Hamdy and A. Meyer in order to be used in finite abelian groups of unknown ord...
Pierre-Alain Fouque, Guillaume Poupard
BMCBI
2006
85views more  BMCBI 2006»
13 years 10 months ago
Identification of physicochemical selective pressure on protein encoding nucleotide sequences
Background: Statistical methods for identifying positively selected sites in protein coding regions are one of the most commonly used tools in evolutionary bioinformatics. However...
Wendy S. W. Wong, Raazesh Sainudiin, Rasmus Nielse...