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» Sequence Alignment as a Database Technology Challenge
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IPPS
2005
IEEE
14 years 1 months ago
RC-BLAST: Towards a Portable, Cost-Effective Open Source Hardware Implementation
Basic Local Alignment Search Tool (BLAST) is a standard computer application that molecular biologists use to search for sequence similarity in genomic databases. This report desc...
Krishna Muriki, Keith D. Underwood, Ron Sass
ICEIS
2003
IEEE
14 years 23 days ago
The Protein Structure Prediction Module of the Prot-Grid Information System
: In this work, we describe the protein secondary structure prediction module of a distributed bio-informatics system. Protein databases contain over a million of sequenced protein...
Dimitrios Vogiatzis, Dimitrios Frosyniotis, George...
CANDC
2006
ACM
13 years 7 months ago
Domain boundary prediction based on profile domain linker propensity index
Successful prediction of protein domain boundaries provides valuable information not only for the computational structure prediction of multidomain proteins but also for the exper...
Qiwen Dong, Xiaolong Wang, Lei Lin, Zhiming Xu
BMCBI
2006
128views more  BMCBI 2006»
13 years 7 months ago
Construction of a nasopharyngeal carcinoma 2D/MS repository with Open Source XML Database - Xindice
Background: Many proteomics initiatives require integration of all information with uniformcriteria from collection of samples and data display to publication of experimental resu...
Feng Li, Maoyu Li, Zhiqiang Xiao, Pengfei Zhang, J...
CLEF
2008
Springer
13 years 9 months ago
Robust Question Answering for Speech Transcripts: UPC Experience in QAst 2008
This paper describes the participation of the Technical University of Catalonia in the CLEF 2008 Question Answering on Speech Transcripts track. We have participated in the Englis...
Pere Comas, Jordi Turmo