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» Sequence Complexity for Biological Sequence Analysis
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BMCBI
2010
91views more  BMCBI 2010»
13 years 8 months ago
Algorithm-driven Artifacts in median polish summarization of Microarray data
Background: High-throughput measurement of transcript intensities using Affymetrix type oligonucleotide microarrays has produced a massive quantity of data during the last decade....
Federico M. Giorgi, Anthony M. Bolger, Marc Lohse,...
CIARP
2005
Springer
14 years 1 months ago
Development and Validation of an Algorithm for Cardiomyocyte Beating Frequency Determination
The Chagas disease or Tripanosomiasis Americana affects between 16 and 18 million people in endemic areas. This disease affects the beating rate of infected patients’ cardiomyocy...
Demian Wassermann, Marta Mejail
WABI
2001
Springer
162views Bioinformatics» more  WABI 2001»
14 years 12 days ago
A Simple Hyper-Geometric Approach for Discovering Putative Transcription Factor Binding Sites
A central issue in molecular biology is understanding the regulatory mechanisms that control gene expression. The recent flood of genomic and postgenomic data opens the way for co...
Yoseph Barash, Gill Bejerano, Nir Friedman
APPT
2007
Springer
13 years 9 months ago
A Parallel BSP Algorithm for Irregular Dynamic Programming
Dynamic programming is a widely applied algorithm design technique in many areas such as computational biology and scientific computing. Typical applications using this technique a...
Malcolm Yoke-Hean Low, Weiguo Liu, Bertil Schmidt
CORR
2007
Springer
127views Education» more  CORR 2007»
13 years 8 months ago
Attribute Exploration of Discrete Temporal Transitions
Discrete temporal transitions occur in a variety of domains, but this work is mainly motivated by applications in molecular biology: explaining and analyzing observed transcriptome...
Johannes Wollbold