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SAC
2003
ACM
14 years 4 months ago
Similar_Join: Extending DBMS with a Bio-specific Operator
Existing sequence comparison software applications lack automation, abstraction, performance, and flexibility. Users need a new way of studying and applying sequence comparisons i...
Jake Yue Chen, John V. Carlis
DATESO
2007
157views Database» more  DATESO 2007»
14 years 6 days ago
Index-Based Approach to Similarity Search in Protein and Nucleotide Databases
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
David Hoksza, Tomás Skopal
ISB
2002
140views more  ISB 2002»
13 years 10 months ago
Computer system "Gene Discovery" for promoter structure analysis
Data Mining and Knowledge Discovery techniques proved to be efficient tools for variety of complex tasks in biology including DNA research. This paper presents implementation of th...
Eugenii E. Vityaev, Yuri L. Orlov, Oleg V. Vishnev...
NAR
2007
109views more  NAR 2007»
13 years 10 months ago
GeneTrees: a phylogenomics resource for prokaryotes
The GeneTrees phylogenomics system pursues comparative genomic analyses from the perspective of gene phylogenies for individual genes. The GeneTrees project has the goal of provid...
Yuying Tian, Allan W. Dickerman
MDM
2009
Springer
116views Communications» more  MDM 2009»
14 years 5 months ago
Finding Probabilistic Nearest Neighbors for Query Objects with Imprecise Locations
—A nearest neighbor query is an important notion in spatial databases and moving object databases. In the emerging application fields of moving object technologies, such as mobi...
Yuichi Iijima, Yoshiharu Ishikawa