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SIGMOD
2011
ACM
150views Database» more  SIGMOD 2011»
12 years 10 months ago
WHAM: a high-throughput sequence alignment method
Over the last decade the cost of producing genomic sequences has dropped dramatically due to the current so called “next-gen” sequencing methods. However, these next-gen seque...
Yinan Li, Allison Terrell, Jignesh M. Patel
BIBE
2005
IEEE
107views Bioinformatics» more  BIBE 2005»
14 years 1 months ago
DSIM: A Distance-Based Indexing Method for Genomic Sequences
In this paper, we propose a Distance-based Sequence Indexing Method (DSIM) for indexing and searching genome databases. Borrowing the idea of video compression, we compress the ge...
Xia Cao, Beng Chin Ooi, HweeHwa Pang, Kian-Lee Tan...
ICDE
2009
IEEE
173views Database» more  ICDE 2009»
14 years 9 months ago
Efficient Processing of Warping Time Series Join of Motion Capture Data
Discovering non-trivial matching subsequences from two time series is very useful in synthesizing novel time series. This can be applied to applications such as motion synthesis wh...
Yueguo Chen, Gang Chen, Ke Chen, Beng Chin Ooi
DAWAK
2009
Springer
14 years 4 months ago
Recommending Multidimensional Queries.
Interactive analysis of datacube, in which a user navigates a cube by launching a sequence of queries is often tedious since the user may have no idea of what the forthcoming query...
Arnaud Giacometti, Elsa Negre, Patrick Marcel
EMNLP
2008
13 years 9 months ago
An Analysis of Active Learning Strategies for Sequence Labeling Tasks
Active learning is well-suited to many problems in natural language processing, where unlabeled data may be abundant but annotation is slow and expensive. This paper aims to shed ...
Burr Settles, Mark Craven