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» Server-Side Parallel Data Reduction and Analysis
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IPPS
2002
IEEE
14 years 3 months ago
Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways
Systemic pathways-oriented approaches to analysis of metabolic networks are effective for small networks but are computationally infeasible for genome scale networks. Current comp...
Nagiza F. Samatova, Al Geist, George Ostrouchov, A...
IPPS
2008
IEEE
14 years 5 months ago
Supporting high performance bioinformatics flat-file data processing using indices
As an essential part of in vitro analysis, biological database query has become more and more important in the research process. A few challenges that are specific to bioinformat...
Xuan Zhang, Gagan Agrawal
EAGC
2004
Springer
14 years 2 months ago
Support for User-Defined Metrics in the Online Performance Analysis Tool G-PM
This paper presents the support for user-defined metrics in the G-PM performance analysis tool. G-PM addresses the demand for aggressive optimisation of Grid applications by using ...
Roland Wismüller, Marian Bubak, Wlodzimierz F...
IPPS
1997
IEEE
14 years 3 months ago
Enhancing Software DSM for Compiler-Parallelized Applications
Current parallelizing compilers for message-passing machines only support a limited class of data-parallel applications. One method for eliminating this restriction is to combine ...
Peter J. Keleher, Chau-Wen Tseng
WOB
2003
140views Bioinformatics» more  WOB 2003»
14 years 6 days ago
Computing Maximum Subsequence in Parallel
The maximum subsequence problem finds the contiguous subsequence of n real numbers with the highest sum. This is an important problem that arises in several contexts in Computatio...
Carlos E. R. Alves, Edson Cáceres, Siang W....