We divide a string into k segments, each with only one sort of symbols, so as to minimize the total number of exceptions. Motivations come from machine learning and data mining. F...
Background: This paper describes techniques for accelerating the performance of the string set matching problem with particular emphasis on applications in computational proteomic...
Yoginder S. Dandass, Shane C. Burgess, Mark Lawren...
The present work clarifies the relation between domains of universal machines and r.e. prefix-free supersets of such sets. One such characterisation can be obtained in terms of the...
Background: Improving the accuracy and efficiency of motif recognition is an important computational challenge that has application to detecting transcription factor binding sites...
—We investigate the k-LCS problem that is finding a longest common subsequence (LCS) for k given input strings. The problem is known to have practical solutions for k = 2, but f...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...