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» Sharp Estimates for Jacobi Matrices and Chain Sequences
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BMCBI
2008
120views more  BMCBI 2008»
13 years 7 months ago
E-CAI: a novel server to estimate an expected value of Codon Adaptation Index (eCAI)
Background: The Codon Adaptation Index (CAI) is a measure of the synonymous codon usage bias for a DNA or RNA sequence. It quantifies the similarity between the synonymous codon u...
Pere Puigbò, Ignacio G. Bravo, Santiago Gar...
APPROX
2006
Springer
130views Algorithms» more  APPROX 2006»
13 years 11 months ago
Robust Mixing
In this paper, we develop a new "robust mixing" framework for reasoning about adversarially modified Markov Chains (AMMC). Let P be the transition matrix of an irreducib...
Murali K. Ganapathy
ALMOB
2007
151views more  ALMOB 2007»
13 years 7 months ago
Local sequence alignments statistics: deviations from Gumbel statistics in the rare-event tail
Background: The optimal score for ungapped local alignments of infinitely long random sequences is known to follow a Gumbel extreme value distribution. Less is known about the imp...
Stefan Wolfsheimer, Bernd Burghardt, Alexander K. ...