Conditional Random Fields (CRFs; Lafferty, McCallum, & Pereira, 2001) provide a flexible and powerful model for learning to assign labels to elements of sequences in such appl...
Thomas G. Dietterich, Adam Ashenfelter, Yaroslav B...
We propose a novel distance based method for phylogenetic tree reconstruction. Our method is based on a conceptual clustering method that extends the well-known decision tree learn...
Protein sequences with unknown functionality are often compared to a set of known sequences to detect functional similarities. Efficient dynamic programming algorithms exist for t...
Weiguo Liu, Bertil Schmidt, Gerrit Voss, Adrian Sc...
The last decade has witnessed an exponential growth of sequence information in the field of biological macromolecules such as proteins and nucleic acids and their interactions wit...
Sandhya Shenoy, B. Jayaram, N. Latha, Pooja Narang...
—Unknown protein sequences are often compared to a set of known sequences (a database scan) to detect functional similarities. Even though efficient dynamic programming algorithm...
Timothy F. Oliver, Bertil Schmidt, Douglas L. Mask...