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ICMLA
2007
13 years 10 months ago
Machine learned regression for abductive DNA sequencing
We construct machine learned regressors to predict the behaviour of DNA sequencing data from the fluorescent labelled Sanger method. These predictions are used to assess hypothes...
David Thornley, Maxim Zverev, Stavros Petridis
EOR
2008
140views more  EOR 2008»
13 years 8 months ago
Combining two pheromone structures for solving the car sequencing problem with Ant Colony Optimization
The car sequencing problem involves scheduling cars along an assembly line while satisfying capacity constraints. In this paper, we describe an Ant Colony Optimization (ACO) algor...
Christine Solnon
JCB
2000
105views more  JCB 2000»
13 years 8 months ago
A Greedy Algorithm for Aligning DNA Sequences
For aligning DNA sequences that differ only by sequencing errors, or by equivalent errors from other sources, a greedy algorithm can be much faster than traditional dynamic progra...
Zheng Zhang 0004, Scott Schwartz, Lukas Wagner, We...
EOR
2008
80views more  EOR 2008»
13 years 8 months ago
An efficient implementation of a VNS/ILS heuristic for a real-life car sequencing problem
The car sequencing problem consists in sequencing a given set of cars to be produced in a single day. We address one of the variants of this problem, in which the objective of mini...
Celso C. Ribeiro, Daniel Aloise, Thiago F. Noronha...
WABI
2004
Springer
14 years 2 months ago
Chaining Algorithms for Alignment of Draft Sequence
Abstract. In this paper we propose a chaining method that can align a draft genomic sequence against a finished genome. We introduce the use of an overlap tree to enhance the state...
Mukund Sundararajan, Michael Brudno, Kerrin Small,...