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» Similarities of Ordered Gene Lists
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BMCBI
2006
103views more  BMCBI 2006»
13 years 11 months ago
Probe-level linear model fitting and mixture modeling results in high accuracy detection of differential gene expression
Background: The identification of differentially expressed genes (DEGs) from Affymetrix GeneChips arrays is currently done by first computing expression levels from the low-level ...
Sébastien Lemieux
BMCBI
2005
131views more  BMCBI 2005»
13 years 11 months ago
Functional annotation by identification of local surface similarities: a novel tool for structural genomics
Background: Protein function is often dependent on subsets of solvent-exposed residues that may exist in a similar three-dimensional configuration in non homologous proteins thus ...
Fabrizio Ferrè, Gabriele Ausiello, Andreas ...
KDD
2012
ACM
242views Data Mining» more  KDD 2012»
12 years 1 months ago
Query-driven discovery of semantically similar substructures in heterogeneous networks
Heterogeneous information networks that contain multiple types of objects and links are ubiquitous in the real world, such as bibliographic networks, cyber-physical networks, and ...
Xiao Yu, Yizhou Sun, Peixiang Zhao, Jiawei Han
ACL
2010
13 years 9 months ago
Extraction and Approximation of Numerical Attributes from the Web
We present a novel framework for automated extraction and approximation of numerical object attributes such as height and weight from the Web. Given an object-attribute pair, we d...
Dmitry Davidov, Ari Rappoport
RECOMB
2005
Springer
14 years 11 months ago
Individual Gene Cluster Statistics in Noisy Maps
Abstract. Identification of homologous chromosomal regions is important for understanding evolutionary processes that shape genome evolution, such as genome rearrangements and larg...
Narayanan Raghupathy, Dannie Durand