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BMCBI
2008
141views more  BMCBI 2008»
13 years 11 months ago
Discovering functional interaction patterns in protein-protein interaction networks
Background: In recent years, a considerable amount of research effort has been directed to the analysis of biological networks with the availability of genome-scale networks of ge...
Mehmet E. Turanalp, Tolga Can
BMCBI
2008
172views more  BMCBI 2008»
13 years 11 months ago
Compo: composite motif discovery using discrete models
Background: Computational discovery of motifs in biomolecular sequences is an established field, with applications both in the discovery of functional sites in proteins and regula...
Geir Kjetil Sandve, Osman Abul, Finn Drablø...
JCST
2008
119views more  JCST 2008»
13 years 11 months ago
Mining Frequent Generalized Itemsets and Generalized Association Rules Without Redundancy
This paper presents some new algorithms to efficiently mine max frequent generalized itemsets (g-itemsets) and essential generalized association rules (g-rules). These are compact ...
Daniel Kunkle, Donghui Zhang, Gene Cooperman
BMCBI
2011
13 years 6 months ago
A Computational Framework for Proteome-Wide Pursuit and Prediction of Metalloproteins using ICP-MS and MS/MS Data
Background: Metal-containing proteins comprise a diverse and sizable category within the proteomes of organisms, ranging from proteins that use metals to catalyze reactions to pro...
W. Andrew Lancaster, Jeremy L. Praissman, Farris L...
ICDE
2009
IEEE
118views Database» more  ICDE 2009»
14 years 5 months ago
An Incremental Threshold Method for Continuous Text Search Queries
Abstract—A text filtering system monitors a stream of incoming documents, to identify those that match the interest profiles of its users. The user interests are registered at ...
Kyriakos Mouratidis, HweeHwa Pang