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» Similarity Search for Multidimensional Data Sequences
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SISAP
2010
IEEE
135views Data Mining» more  SISAP 2010»
13 years 6 months ago
Improving the similarity search of tandem mass spectra using metric access methods
In biological applications, the tandem mass spectrometry is a widely used method for determining protein and peptide sequences from an ”in vitro” sample. The sequences are not...
Jiri Novák, Tomás Skopal, David Hoks...
BMCBI
2008
142views more  BMCBI 2008»
13 years 7 months ago
Optimal neighborhood indexing for protein similarity search
Background: Similarity inference, one of the main bioinformatics tasks, has to face an exponential growth of the biological data. A classical approach used to cope with this data ...
Pierre Peterlongo, Laurent Noé, Dominique L...
EDBT
2009
ACM
277views Database» more  EDBT 2009»
14 years 5 days ago
G-hash: towards fast kernel-based similarity search in large graph databases
Structured data including sets, sequences, trees and graphs, pose significant challenges to fundamental aspects of data management such as efficient storage, indexing, and simila...
Xiaohong Wang, Aaron M. Smalter, Jun Huan, Gerald ...
SIGMOD
1997
ACM
134views Database» more  SIGMOD 1997»
13 years 11 months ago
Similarity-Based Queries for Time Series Data
We study similarity queries for time series data where similarity is defined in terms of a set of linear transformations on the Fourier series representation of a sequence. We ha...
Davood Rafiei, Alberto O. Mendelzon
ICDE
1999
IEEE
134views Database» more  ICDE 1999»
14 years 9 months ago
On Similarity-Based Queries for Time Series Data
We study similarity queries for time series data where similarity is defined in terms of a set of linear transformations on the Fourier series representation of a sequence. We hav...
Davood Rafiei