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BMCBI
2006
112views more  BMCBI 2006»
13 years 7 months ago
A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database
Background: We present here the PhIGs database, a phylogenomic resource for sequenced genomes. Although many methods exist for clustering gene families, very few attempt to create...
Paramvir S. Dehal, Jeffrey L. Boore
BMCBI
2006
91views more  BMCBI 2006»
13 years 7 months ago
In silico identification of putative promoter motifs of White Spot Syndrome Virus
Background: White Spot Syndrome Virus, a member of the virus family Nimaviridae, is a large dsDNA virus infecting shrimp and other crustacean species. Although limited information...
Hendrik Marks, Xin-Ying Ren, Hans Sandbrink, Mari&...
BMCBI
2004
95views more  BMCBI 2004»
13 years 7 months ago
PCOGR: Phylogenetic COG ranking as an online tool to judge the specificity of COGs with respect to freely definable groups of or
Background: The rapidly increasing number of completely sequenced genomes led to the establishment of the COG-database which, based on sequence homologies, assigns similar protein...
Florian Meereis, Michael Kaufmann
PPOPP
2006
ACM
14 years 1 months ago
On-line automated performance diagnosis on thousands of processes
Performance analysis tools are critical for the effective use of large parallel computing resources, but existing tools have failed to address three problems that limit their scal...
Philip C. Roth, Barton P. Miller
CLEF
2005
Springer
14 years 1 months ago
UNED at iCLEF 2005: Automatic Highlighting of Potential Answers
In this paper, we describe UNED’s participation in the iCLEF 2005 track. We have compared two strategies for finding an answer using an interactive question answering system: i...
Víctor Peinado, Fernando López-Osten...