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» Similarity Search on Time Series Based on Threshold Queries
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BIOCOMP
2007
13 years 10 months ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
Xuehui Li, Tamer Kahveci
ECIR
2007
Springer
13 years 10 months ago
Searching Documents Based on Relevance and Type
This paper extends previous work on document retrieval and document type classification, addressing the problem of ‘typed search’. Specifically, given a query and a designated ...
Jun Xu, Yunbo Cao, Hang Li, Nick Craswell, Yalou H...
DATESO
2007
157views Database» more  DATESO 2007»
13 years 10 months ago
Index-Based Approach to Similarity Search in Protein and Nucleotide Databases
When searching databases of nucleotide or protein sequences, ï¬nding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
David Hoksza, Tomás Skopal
WEBI
2009
Springer
14 years 3 months ago
Fast Matching for All Pairs Similarity Search
All pairs similarity search is the problem of ï¬nding all pairs of records that have a similarity score above the speciï¬ed threshold. Many real-world systems like search engine...
Amit C. Awekar, Nagiza F. Samatova
WABI
2009
Springer
102views Bioinformatics» more  WABI 2009»
14 years 3 months ago
A Tree Based Method for the Rapid Screening of Chemical Fingerprints
Background: The fingerprint of a molecule is a bitstring based on its structure, constructed such that structurally similar molecules will have similar fingerprints. Molecular fin...
Thomas G. Kristensen, Jesper Nielsen, Christian N....