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» Simple Software for Microarray Image Analysis
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BMCBI
2010
134views more  BMCBI 2010»
13 years 7 months ago
ScreenMill: A freely available software suite for growth measurement, analysis and visualization of high-throughput screen data
Background: Many high-throughput genomic experiments, such as Synthetic Genetic Array and yeast two-hybrid, use colony growth on solid media as a screen metric. These experiments ...
John C. Dittmar, Robert J. D. Reid, Rodney Rothste...
CSSE
2008
IEEE
14 years 1 months ago
Image Segmentation Based on 2D Otsu Method with Histogram Analysis
—Image segmentation plays an important role in image analysis and computer vision system. Among all segmentation techniques, the automatic thresholding methods are widely used be...
Jun Zhang, Jinglu Hu
BMCBI
2008
144views more  BMCBI 2008»
13 years 7 months ago
WGCNA: an R package for weighted correlation network analysis
Background: Correlation networks are increasingly being used in bioinformatics applications. For example, weighted gene co-expression network analysis is a systems biology method ...
Peter Langfelder, Steve Horvath
SCFBM
2008
151views more  SCFBM 2008»
13 years 7 months ago
Wndchrm - an open source utility for biological image analysis
Background: Biological imaging is an emerging field, covering a wide range of applications in biological and clinical research. However, while machinery for automated experimentin...
Lior Shamir, Nikita Orlov, D. Mark Eckley, Tomasz ...
ICIP
2009
IEEE
13 years 5 months ago
Model based analysis for quantization parameter cascading in hierarchical video coding
Originally, the hierarchical coding structure was proposed to achieve temporal scalability. Soon after, it was realized that with a proper quantization parameter cascading (QPC) s...
Xiang Li, Peter Amon, Andreas Hutter, André...