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142
Voted
BMCBI
2010
118views more  BMCBI 2010»
15 years 3 months ago
From learning taxonomies to phylogenetic learning: Integration of 16S rRNA gene data into FAME-based bacterial classification
Background: Machine learning techniques have shown to improve bacterial species classification based on fatty acid methyl ester (FAME) data. Nonetheless, FAME analysis has a limit...
Bram Slabbinck, Willem Waegeman, Peter Dawyndt, Pa...
129
Voted
BMCBI
2008
125views more  BMCBI 2008»
15 years 3 months ago
A fast algorithm for the multiple genome rearrangement problem with weighted reversals and transpositions
Background: Due to recent progress in genome sequencing, more and more data for phylogenetic reconstruction based on rearrangement distances between genomes become available. Howe...
Martin Bader, Mohamed Ibrahim Abouelhoda, Enno Ohl...
131
Voted
INFOCOM
2012
IEEE
13 years 6 months ago
Robust multi-source network tomography using selective probes
—Knowledge of a network’s topology and internal characteristics such as delay times or losses is crucial to maintain seamless operation of network services. Network tomography ...
Akshay Krishnamurthy, Aarti Singh
138
Voted
DLT
2006
15 years 5 months ago
Closure of Language Classes Under Bounded Duplication
Duplication is an operation generating a language from a single word by iterated application of rewriting rules u uu on factors. We extend this operation to entire languages and i...
Masami Ito, Peter Leupold, Kayoko Shikishima-Tsuji
144
Voted
BMCBI
2005
162views more  BMCBI 2005»
15 years 3 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes