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    » Smoothing Gene Expression Using Biological Networks
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    BMCBI
    2010
    171views more  BMCBI 2010»
    PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
    13 years 7 months ago
    PyMix - The Python mixture package - a tool for clustering of heterogeneous biological data
    Download  www.biomedcentral.com
    Background: Cluster analysis is an important technique for the exploratory analysis of biological data. Such data is often high-dimensional, inherently noisy and contains outliers...
    Benjamin Georgi, Ivan Gesteira Costa, Alexander Sc...
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    ICASSP
    2011
    IEEE
    271views Signal Processing» more  ICASSP 2011»
    Uncover cooperative gene regulations by microRNAs and transcription factors in glioblastoma using a nonnegative hybrid factor mo
    12 years 11 months ago
    Uncover cooperative gene regulations by microRNAs and transcription factors in glioblastoma using a nonnegative hybrid factor mo
    Download  mirlab.org
    —Transcriptional regulation by transcription factors (TFs) and microRNAs controls when and how much RNA is created. Due to technical limitations, the protein level expressions of...
    Jia Meng, Hung-I Harry Chen, Jianqiu Zhang, Yidong...
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    BCB
    2010
    175views Bioinformatics» more  BCB 2010»
    Gene set analysis using principal components
    13 years 2 months ago
    Gene set analysis using principal components
    Download  www.cs.unc.edu
    We present a new method for identifying gene sets associated with labeled samples, where the labels can be case versus control, or genotype differences. Existing approaches to thi...
    Isa Kemal Pakatci, Wei Wang, Leonard McMillan
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    BMCBI
    2005
    169views more  BMCBI 2005»
    Genetic interaction motif finding by expectation maximization - a novel statistical model for inferring gene modules from synthe
    13 years 7 months ago
    Genetic interaction motif finding by expectation maximization - a novel statistical model for inferring gene modules from synthe
    Download  www.biomedcentral.com
    Background: Synthetic lethality experiments identify pairs of genes with complementary function. More direct functional associations (for example greater probability of membership...
    Yan Qi 0003, Ping Ye, Joel S. Bader
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    BMCBI
    2008
    118views more  BMCBI 2008»
    PseudoGeneQuest - Service for identification of different pseudogene types in the human genome
    13 years 7 months ago
    PseudoGeneQuest - Service for identification of different pseudogene types in the human genome
    Download  www.biomedcentral.com
    Background: Pseudogenes, nonfunctional copies of genes, evolve fast due the lack of evolutionary pressures and thus appear in several different forms. PseudoGeneQuest is an online...
    Csaba P. Ortutay, Mauno Vihinen
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