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BMCBI
2008
178views more  BMCBI 2008»
13 years 9 months ago
Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
Background: The DNA microarray technology allows the measurement of expression levels of thousands of genes under tens/hundreds of different conditions. In microarray data, genes ...
Kin-On Cheng, Ngai-Fong Law, Wan-Chi Siu, Alan Wee...
BMCBI
2010
196views more  BMCBI 2010»
13 years 6 months ago
Content-based microarray search using differential expression profiles
Background: With the expansion of public repositories such as the Gene Expression Omnibus (GEO), we are rapidly cataloging cellular transcriptional responses to diverse experiment...
Jesse M. Engreitz, Alexander A. Morgan, Joel Dudle...
ICDT
2012
ACM
235views Database» more  ICDT 2012»
11 years 11 months ago
Equivalence and minimization of conjunctive queries under combined semantics
The problems of query containment, equivalence, and minimization are recognized as very important in the context of query processing, specifically of query optimization. In their...
Rada Chirkova
PLDI
2000
ACM
14 years 1 months ago
A framework for interprocedural optimization in the presence of dynamic class loading
Dynamic class loading during program execution in the JavaTM Programming Language is an impediment for generating code that is as e cient as code generated using static wholeprogr...
Vugranam C. Sreedhar, Michael G. Burke, Jong-Deok ...
BMCBI
2010
132views more  BMCBI 2010»
13 years 9 months ago
Error margin analysis for feature gene extraction
Background: Feature gene extraction is a fundamental issue in microarray-based biomarker discovery. It is normally treated as an optimization problem of finding the best predictiv...
Chi Kin Chow, Hai Long Zhu, Jessica Lacy, Winston ...