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BMCBI
2006
116views more  BMCBI 2006»
15 years 3 months ago
JColorGrid: software for the visualization of biological measurements
Background: Two-dimensional data colourings are an effective medium by which to represent three-dimensional data in two dimensions. Such "color-grid" representations hav...
Marcin P. Joachimiak, Jennifer L. Weissman, Barnab...
PVLDB
2008
98views more  PVLDB 2008»
15 years 2 months ago
Performance profiling with EndoScope, an acquisitional software monitoring framework
We propose EndoScope, a software monitoring framework that allows users to pose declarative queries that monitor the state and performance of running programs. Unlike most existin...
Alvin Cheung, Samuel Madden
BMCBI
2011
14 years 10 months ago
ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring
Background: Since its inception, proteomics has essentially operated in a discovery mode with the goal of identifying and quantifying the maximal number of proteins in a sample. I...
Mi-Youn K. Brusniak, Sung-Tat Kwok, Mark Christian...
ECCE
2007
15 years 5 months ago
Cross-participants: fostering design-use mediation in an open source software community
Motivation – This research aims at investigating emerging roles and forms of participation fostering design-use mediation during the Open Source Software design process Research...
Flore Barcellini, Françoise Détienne...
BMCBI
2008
111views more  BMCBI 2008»
15 years 3 months ago
SciDBMaker: new software for computer-aided design of specialized biological databases
Background: The exponential growth of research in molecular biology has brought concomitant proliferation of databases for stocking its findings. A variety of protein sequence dat...
Riadh Hammami, Abdelmajid Zouhir, Karim Naghmouchi...