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BMCBI
2006
116views more  BMCBI 2006»
13 years 10 months ago
JColorGrid: software for the visualization of biological measurements
Background: Two-dimensional data colourings are an effective medium by which to represent three-dimensional data in two dimensions. Such "color-grid" representations hav...
Marcin P. Joachimiak, Jennifer L. Weissman, Barnab...
PVLDB
2008
98views more  PVLDB 2008»
13 years 9 months ago
Performance profiling with EndoScope, an acquisitional software monitoring framework
We propose EndoScope, a software monitoring framework that allows users to pose declarative queries that monitor the state and performance of running programs. Unlike most existin...
Alvin Cheung, Samuel Madden
BMCBI
2011
13 years 5 months ago
ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring
Background: Since its inception, proteomics has essentially operated in a discovery mode with the goal of identifying and quantifying the maximal number of proteins in a sample. I...
Mi-Youn K. Brusniak, Sung-Tat Kwok, Mark Christian...
ECCE
2007
13 years 12 months ago
Cross-participants: fostering design-use mediation in an open source software community
Motivation – This research aims at investigating emerging roles and forms of participation fostering design-use mediation during the Open Source Software design process Research...
Flore Barcellini, Françoise Détienne...
BMCBI
2008
111views more  BMCBI 2008»
13 years 10 months ago
SciDBMaker: new software for computer-aided design of specialized biological databases
Background: The exponential growth of research in molecular biology has brought concomitant proliferation of databases for stocking its findings. A variety of protein sequence dat...
Riadh Hammami, Abdelmajid Zouhir, Karim Naghmouchi...