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» Software for Annotating Argument Structure
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BMCBI
2004
120views more  BMCBI 2004»
13 years 7 months ago
pdb-care (PDB CArbohydrate REsidue check): a program to support annotation of complex carbohydrate structures in PDB files
Background: Carbohydrates are involved in a variety of fundamental biological processes and pathological situations. They therefore have a large pharmaceutical and diagnostic pote...
Thomas Lütteke, Claus-Wilhelm von der Lieth
BMCBI
2011
13 years 2 months ago
R2R - software to speed the depiction of aesthetic consensus RNA secondary structures
Background: With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these mol...
Zasha Weinberg, Ronald R. Breaker
BMCBI
2008
109views more  BMCBI 2008»
13 years 7 months ago
LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons
Background: Transposable elements are abundant in eukaryotic genomes and it is believed that they have a significant impact on the evolution of gene and chromosome structure. Whil...
David Ellinghaus, Stefan Kurtz, Ute Willhoeft
TSD
2000
Springer
13 years 11 months ago
Automatic Functor Assignment in the Prague Dependency Treebank
The aim of this paper is to describe and evaluate a system that automates a part of the transition from analytical to tectogrammatical tree structures within the Prague Dependency...
Zdenek Zabokrtský
LREC
2008
143views Education» more  LREC 2008»
13 years 9 months ago
Enriching the Venice Italian Treebank with Dependency and Grammatical Relations
In this paper we propose a rule-based approach to extract dependency and grammatical relations from the Venice Italian Treebank (VIT) (Delmonte et al., 2007) with bracketed tree s...
Sara Tonelli, Rodolfo Delmonte, Antonella Bristot