The systolic array paradigm has low communication demand because it does not use costly global communication and each processor communicates with few other processors. It is thus s...
Background: It has been repeatedly observed that gene order is rapidly lost in prokaryotic genomes. However, persistent synteny blocks are found when comparing more or less distan...
We present a theoretical model for self-assembling tiles with flexible branches motivated by DNA branched junction molecules. We encode an instance of a “problem” as a pot of ...
Abstract. One phylogeny-based approach to horizontal gene transfer (HGT) detection entails comparing the topology of a gene tree to that of the species tree, and using their differ...
We present an evolutionary methodology that explores the evolution of network topology when a uniform growth of the network traffic is considered. The network redesign problem is ...