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» Solutions to Computational Problems Through Gene Assembly
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CORR
2010
Springer
120views Education» more  CORR 2010»
13 years 7 months ago
Modeling of 2D and 3D Assemblies Taking Into Account Form Errors of Plane Surfaces
The tolerancing process links the virtual and the real worlds. From the former, tolerances define a variational geometrical language (geometric parameters). From the latter, there...
Serge Samper, Pierre-Antoine Adragna, Hugues Favre...
BMCBI
2011
12 years 11 months ago
SeqGene: a comprehensive software solution for mining exome- and transcriptome- sequencing data
Background: The popularity of massively parallel exome and transcriptome sequencing projects demands new data mining tools with a comprehensive set of features to support a wide r...
Xutao Deng
CORR
2007
Springer
81views Education» more  CORR 2007»
13 years 7 months ago
Faster exon assembly by sparse spliced alignment
Assembling a gene from candidate exons is an important problem in computational biology. Among the most successful approaches to this problem is spliced alignment, proposed by Gelf...
Alexandre Tiskin
TCS
2008
13 years 7 months ago
Solving NP-complete problems in the tile assembly model
Formalized study of self-assembly has led to the definition of the tile assembly model, a highly distributed parallel model of computation that may be implemented using molecules ...
Yuriy Brun
RECOMB
2001
Springer
14 years 8 months ago
A new approach to fragment assembly in DNA sequencing
For the last twenty years fragment assembly in DNA sequencing followed the "overlap - layout - consensus" paradigm that is used in all currently available assembly tools...
Pavel A. Pevzner, Haixu Tang, Michael S. Waterman