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» Some Observations on Indifferentiability
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BMCBI
2011
14 years 11 months ago
Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling
Background: Molecular database search tools need statistical models to assess the significance for the resulting hits. In the classical approach one asks the question how probable...
Stefan Wolfsheimer, Inke Herms, Sven Rahmann, Alex...
BMCBI
2011
14 years 11 months ago
Estimating developmental states of tumors and normal tissues using a linear time-ordered model
Background: Tumor cells are considered to have an aberrant cell state, and some evidence indicates different development states appearing in the tumorigenesis. Embryonic developme...
Bo Zhang, Beibei Chen, Tao Wu, Zhenyu Xuan, Xiaope...
BMCBI
2011
14 years 11 months ago
Tiling array data analysis: a multiscale approach using wavelets
Background: Tiling array data is hard to interpret due to noise. The wavelet transformation is a widely used technique in signal processing for elucidating the true signal from no...
Alexander Karpikov, Joel S. Rozowsky, Mark Gerstei...
CSCW
2011
ACM
14 years 11 months ago
"Not my bug!" and other reasons for software bug report reassignments
Bug reporting/fixing is an important social part of the software development process. The bug-fixing process inherently has strong inter-personal dynamics at play, especially in h...
Philip J. Guo, Thomas Zimmermann, Nachiappan Nagap...
SIAMDM
2011
14 years 11 months ago
Stable Roommates Matchings, Mirror Posets, Median Graphs, and the Local/Global Median Phenomenon in Stable Matchings
For stable marriage (SM) and solvable stable roommates (SR) instances, it is known that there are stable matchings that assign each participant to his or her (lower/upper) median ...
Christine T. Cheng, Anhua Lin