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BMCBI
2008
115views more  BMCBI 2008»
13 years 7 months ago
Principal components analysis based methodology to identify differentially expressed genes in time-course microarray data
Background: Time-course microarray experiments are being increasingly used to characterize dynamic biological processes. In these experiments, the goal is to identify genes differ...
Sudhakar Jonnalagadda, Rajagopalan Srinivasan
BMCBI
2008
129views more  BMCBI 2008»
13 years 7 months ago
Gene set enrichment analysis for non-monotone association and multiple experimental categories
Background: Recently, microarray data analyses using functional pathway information, e.g., gene set enrichment analysis (GSEA) and significance analysis of function and expression...
Rongheng Lin, Shuangshuang Dai, Richard D. Irwin, ...
CORR
2010
Springer
117views Education» more  CORR 2010»
13 years 7 months ago
Evolution with Drifting Targets
We consider the question of the stability of evolutionary algorithms to gradual changes, or drift, in the target concept. We define an algorithm to be resistant to drift if, for s...
Varun Kanade, Leslie G. Valiant, Jennifer Wortman ...
CORR
2010
Springer
172views Education» more  CORR 2010»
13 years 7 months ago
The MUSIC Algorithm for Sparse Objects: A Compressed Sensing Analysis
The MUSIC algorithm, and its extension for imaging sparse extended objects, with noisy data is analyzed by compressed sensing (CS) techniques. A thresholding rule is developed to a...
Albert Fannjiang
CORR
2010
Springer
92views Education» more  CORR 2010»
13 years 7 months ago
Parameterizing by the Number of Numbers
The usefulness of parameterized algorithmics has often depended on what Niedermeier has called, "the art of problem parameterization." In this paper we introduce and expl...
Michael R. Fellows, Serge Gaspers, Frances A. Rosa...