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» Spatio-Temporal Alignment of Sequences
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COCOA
2007
Springer
14 years 1 months ago
A New Dynamic Programming Algorithm for Multiple Sequence Alignment
Abstract. Multiple sequence alignment (MSA) is one of the most basic and central tasks for many studies in modern biology. In this paper, we present a new progressive alignment alg...
Jean-Michel Richer, Vincent Derrien, Jin-Kao Hao
STOC
2000
ACM
156views Algorithms» more  STOC 2000»
14 years 1 days ago
Near optimal multiple alignment within a band in polynomial time
Multiple sequence alignment is a fundamental problem in computational biology. Because of its notorious difficulties, aligning sequences within a constant band (c-diagonal) is a ...
Ming Li, Bin Ma, Lusheng Wang
BIOINFORMATICS
2000
110views more  BIOINFORMATICS 2000»
13 years 7 months ago
ProtEST: protein multiple sequence alignments from expressed sequence tags
James A. Cuff, Ewan Birney, Michele E. Clamp, Geof...
DEXA
2007
Springer
150views Database» more  DEXA 2007»
14 years 1 months ago
Sequence Alignment as a Database Technology Challenge
Abstract. Sequence alignment is an important task for molecular biologists. Because alignment basically deals with approximate string matching on large biological sequence collecti...
Hans Philippi