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» Spatio-Temporal Alignment of Sequences
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KCAP
2009
ACM
14 years 13 days ago
Combining vocabulary alignment techniques
Identifying alignments between vocabularies has become a central knowledge engineering activity. A plethora of alignment techniques has been developed over the past years. In this...
Anna Tordai, Jacco van Ossenbruggen, Guus Schreibe...
NAACL
2007
13 years 9 months ago
Applying Many-to-Many Alignments and Hidden Markov Models to Letter-to-Phoneme Conversion
Letter-to-phoneme conversion generally requires aligned training data of letters and phonemes. Typically, the alignments are limited to one-to-one alignments. We present a novel t...
Sittichai Jiampojamarn, Grzegorz Kondrak, Tarek Sh...
BIBE
2007
IEEE
147views Bioinformatics» more  BIBE 2007»
14 years 2 months ago
A New Alignment-Independent Algorithm for Clustering Protein Sequences
—The rapid burgeoning of available protein data makes the use of clustering within families of proteins increasingly important, the challenge is to identify subfamilies of evolut...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski
BMCBI
2006
130views more  BMCBI 2006»
13 years 7 months ago
4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing
Background: In sequence analysis the multiple alignment builds the fundament of all proceeding analyses. Errors in an alignment could strongly influence all succeeding analyses an...
Philipp N. Seibel, Tobias Müller, Thomas Dand...
BMCBI
2006
86views more  BMCBI 2006»
13 years 7 months ago
MCALIGN2: Faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution
Background: Non-coding DNA sequences comprise a very large proportion of the total genomic content of mammals, most other vertebrates, many invertebrates, and most plants. Unravel...
Jun Wang, Peter D. Keightley, Toby Johnson