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IPPS
2009
IEEE
14 years 4 months ago
Dynamic parallelization for RNA structure comparison
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
Eric Snow, Eric Aubanel, Patricia Evans
ESA
2009
Springer
129views Algorithms» more  ESA 2009»
14 years 4 months ago
Dynamic vs. Oblivious Routing in Network Design
Consider the robust network design problem of finding a minimum cost network with enough capacity to route all traffic demand matrices in a given polytope. We investigate the impa...
Navin Goyal, Neil Olver, F. Bruce Shepherd
COMPGEOM
2009
ACM
14 years 4 months ago
On grids in topological graphs
A topological graph is a graph drawn in the plane with vertices represented by points and edges as arcs connecting its vertices. A k-grid in a topological graph is a pair of edge ...
Eyal Ackerman, Jacob Fox, János Pach, Andre...
CSMR
2008
IEEE
14 years 4 months ago
How Lisp Systems Look Different
Many reverse engineering approaches have been developed to analyze software systems written in different languages like C/C++ or Java. These approaches typically rely on a meta-mo...
Adrian Dozsa, Tudor Gîrba, Radu Marinescu
HICSS
2008
IEEE
129views Biometrics» more  HICSS 2008»
14 years 4 months ago
Integration Testing of Composite Applications
A service-oriented architecture enables composite applications that support business processes to be defined and built dynamically from loosely coupled and interoperable web servi...
Liam Peyton, Bernard Stepien, Pierre Seguin