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ISBI
2011
IEEE
12 years 11 months ago
Discriminative persistent homology of brain networks
It is known that the brain network has small-world and scalefree topology, but the network structures drastically change depending on how to threshold a connectivity matrix. The e...
Hyekyoung Lee, Moo K. Chung, Hyejin Kang, Bung-Nyu...
BMCBI
2004
150views more  BMCBI 2004»
13 years 7 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
BMCBI
2008
123views more  BMCBI 2008»
13 years 7 months ago
Validation of protein models by a neural network approach
Background: The development and improvement of reliable computational methods designed to evaluate the quality of protein models is relevant in the context of protein structure re...
Paolo Mereghetti, Maria Luisa Ganadu, Elena Papale...
KDD
2007
ACM
168views Data Mining» more  KDD 2007»
14 years 8 months ago
Finding tribes: identifying close-knit individuals from employment patterns
We present a family of algorithms to uncover tribes--groups of individuals who share unusual sequences of affiliations. While much work inferring community structure describes lar...
Lisa Friedland, David Jensen
BMCBI
2005
119views more  BMCBI 2005»
13 years 7 months ago
The distance-profile representation and its application to detection of distantly related protein families
Background: Detecting homology between remotely related protein families is an important problem in computational biology since the biological properties of uncharacterized protei...
Chin-Jen Ku, Golan Yona