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    » Statistical significance in biological sequence analysis
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    ALMOB
    2006
    155views more  ALMOB 2006»
    A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
    13 years 7 months ago
    A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
    Download  www.almob.org
    Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
    Jonathan E. Allen, Steven L. Salzberg
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    BMCBI
    2005
    133views more  BMCBI 2005»
    Ab initio identification of putative human transcription factor binding sites by comparative genomics
    13 years 7 months ago
    Ab initio identification of putative human transcription factor binding sites by comparative genomics
    Download  www.biomedcentral.com
    Background: Understanding transcriptional regulation of gene expression is one of the greatest challenges of modern molecular biology. A central role in this mechanism is played b...
    Davide Corà, Carl Herrmann, Christoph Diete...
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    BMCBI
    2005
    190views more  BMCBI 2005»
    Species-specific analysis of protein sequence motifs using mutual information
    13 years 7 months ago
    Species-specific analysis of protein sequence motifs using mutual information
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    Background: Protein sequence motifs are by definition short fragments of conserved amino acids, often associated with a specific function. Accordingly protein sequence profiles de...
    Jan Hummel, Nima Keshvari, Wolfram Weckwerth, Joac...
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    BMCBI
    2006
    156views more  BMCBI 2006»
    GOFFA: Gene Ontology For Functional Analysis - A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data
    13 years 7 months ago
    GOFFA: Gene Ontology For Functional Analysis - A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data
    Download  www.biomedcentral.com
    Background: Gene Ontology (GO) characterizes and categorizes the functions of genes and their products according to biological processes, molecular functions and cellular componen...
    Hongmei Sun, Hong Fang, Tao Chen, Roger Perkins, W...
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    ISAMI
    2010
    119views Emerging Technology» more  ISAMI 2010»
    Employing Compact Intra-genomic Language Models to Predict Genomic Sequences and Characterize Their Entropy
    13 years 5 months ago
    Employing Compact Intra-genomic Language Models to Predict Genomic Sequences and Characterize Their Entropy
    Download  marco.uminho.pt
    Probabilistic models of languages are fundamental to understand and learn the profile of the subjacent code in order to estimate its entropy, enabling the verification and predicti...
    Sérgio A. D. Deusdado, Paulo Carvalho
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