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BMCBI
2005
212views more  BMCBI 2005»
13 years 7 months ago
PAGE: Parametric Analysis of Gene Set Enrichment
Background: Gene set enrichment analysis (GSEA) is a microarray data analysis method that uses predefined gene sets and ranks of genes to identify significant biological changes i...
Seon-Young Kim, David J. Volsky
JAL
2000
119views more  JAL 2000»
13 years 7 months ago
On Markov Chains for Independent Sets
Random independent sets in graphs arise, for example, in statistical physics, in the hard-core model of a gas. In 1997, Luby and Vigoda described a rapidly mixing Markov chain for...
Martin E. Dyer, Catherine S. Greenhill
EJC
2010
13 years 7 months ago
Packing sets of patterns
Packing density is a permutation occurrence statistic which describes the maximal number of permutations of a given type that can occur in another permutation. In this article we ...
Alexander Burstein, Peter Hästö
BMCBI
2011
12 years 11 months ago
Gene set analysis for longitudinal gene expression data
Background: Gene set analysis (GSA) has become a successful tool to interpret gene expression profiles in terms of biological functions, molecular pathways, or genomic locations. ...
Ke Zhang, Haiyan Wang, Arne C. Bathke, Solomon W. ...
ISBI
2008
IEEE
14 years 8 months ago
Controlling the error in FMRI: Hypothesis testing or set estimation?
This paper describes a new methodology and associated theoretical analysis for rapid and accurate extraction of activation regions from functional MRI data. Most fMRI data analysi...
Aarti Singh, Rebecca Willett, Robert Nowak, Zachar...