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» Statistics of large scale sequence searching
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CIKM
2009
Springer
13 years 11 months ago
Suffix trees for very large genomic sequences
A suffix tree is a fundamental data structure for string searching algorithms. Unfortunately, when it comes to the use of suffix trees in real-life applications, the current metho...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...
WWW
2009
ACM
14 years 8 months ago
Matchbox: large scale online bayesian recommendations
We present a probabilistic model for generating personalised recommendations of items to users of a web service. The Matchbox system makes use of content information in the form o...
David H. Stern, Ralf Herbrich, Thore Graepel
BMCBI
2005
115views more  BMCBI 2005»
13 years 7 months ago
Statistical distributions of optimal global alignment scores of random protein sequences
Background: The inference of homology from statistically significant sequence similarity is a central issue in sequence alignments. So far the statistical distribution function un...
Hongxia Pang, Jiaowei Tang, Su-Shing Chen, Shiheng...
CSB
2003
IEEE
110views Bioinformatics» more  CSB 2003»
14 years 27 days ago
Statistical Inference for Well-ordered Structures in Nucleotide Sequences
Distinct, local structures are frequently correlated with functional RNA elements involved in posttranscriptional regulation of gene expression. Discovery of microRNAs (miRNAs) su...
Shu-Yun Le, Jih-H. Chen, Jacob V. Maizel
KDD
2009
ACM
169views Data Mining» more  KDD 2009»
14 years 2 months ago
On burstiness-aware search for document sequences
As the number and size of large timestamped collections (e.g. sequences of digitized newspapers, periodicals, blogs) increase, the problem of efficiently indexing and searching su...
Theodoros Lappas, Benjamin Arai, Manolis Platakis,...