Sciweavers

82 search results - page 1 / 17
» Stochastic Simulation of Biological Systems with Dynamical C...
Sort
View
CMSB
2011
Springer
12 years 10 months ago
Coloured stochastic multilevel multiset rewriting
From the phosphorylation state of a molecule to the volume of a cell, parameters are ubiquitous in systems biology. At the same time, most models involve static or dynamic compart...
Nicolas Oury, Gordon D. Plotkin
CORR
2010
Springer
105views Education» more  CORR 2010»
13 years 8 months ago
On Designing Multicore-aware Simulators for Biological Systems
The stochastic simulation of biological systems is an increasingly popular technique in bioinformatics. It often is an enlightening technique, which may however result in being com...
Marco Aldinucci, Mario Coppo, Ferruccio Damiani, M...
ACRI
2006
Springer
14 years 4 months ago
CA Simulation of Biological Evolution in Genetic Hyperspace
Abstract. Realistic simulation of biological evolution by necessity requires simplification and reduction in the dimensionality of the corresponding dynamic system. Even when this...
Michael A. Saum, Sergey Gavrilets
CIBCB
2007
IEEE
14 years 5 months ago
Modeling protein-DNA binding time in Stochastic Discrete Event Simulation of Biological Processes
Abstract— This paper presents a parametric model to estimate the DNA-protein binding time using the DNA and protein structures and details of the binding site. To understand the ...
Preetam Ghosh, Samik Ghosh, Kalyan Basu, Sajal K. ...