263 search results - page 10 / 53 » Stochastic pairwise alignments |
BIOCOMP
2006
13 years 9 months ago
2006
Computation of multiple sequence alignments is one of the major open problems in computational molecular biology. The purpose of this study was to provide a new method, PAC (Progre...
BMCBI
2011
13 years 2 months ago
2011
Background: We present a novel method to encode ambiguously aligned regions in fixed multiple sequence alignments by ‘Pairwise Identity and Cost Scores Ordination’ (PICS-Ord)....
AAAI
2004
13 years 9 months ago
2004
Obtaining an accurate multiple alignment of protein sequences is a difficult computational problem for which many heuristic techniques sacrifice optimality to achieve reasonable r...
PPSN
2004
Springer
14 years 1 months ago
2004
Springer
Abstract. The multiple sequence alignment problem (MSA) can be reformulated as the problem of finding a maximum weight trace in an alignment graph, which is derived from all pairw...
GECCO
2003
Springer
14 years 25 days ago
2003
Springer
This article presents a model for DNA sequence alignment. In our model, a finite state automaton writes two-dimensional maps of nucleotide sequences. An evolutionary method for se...