263 search results - page 6 / 53 » Stochastic pairwise alignments |
RECOMB
2005
Springer
14 years 8 months ago
2005
Springer
Abstract. With ever increasing amount of available data on protein-protein interaction (PPI) networks and research revealing that these networks evolve at a modular level, discover...
TCBB
2008
13 years 7 months ago
2008
The subcellular locations of proteins are important functional annotations. An effective and reliable subcellular localization method is necessary for proteomics research. This pap...
BMCBI
2008
13 years 7 months ago
2008
Background: Aligning RNA sequences with low sequence identity has been a challenging problem since such a computation essentially needs an algorithm with high complexities for tak...
BMCBI
2008
13 years 7 months ago
2008
Background: Confidence in pairwise alignments of biological sequences, obtained by various methods such as Blast or Smith-Waterman, is critical for automatic analyses of genomic d...
WABI
2009
Springer
14 years 2 months ago
2009
Springer
We present a novel dynamic programming framework that allows one to compute tight upper bounds for the p-values of gapped local alignments in pseudo–polynomial time. Our algorith...