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» Storage and Retrieval of Individual Genomes
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ICDE
2007
IEEE
190views Database» more  ICDE 2007»
14 years 12 days ago
CPS-tree: A Compact Partitioned Suffix Tree for Disk-based Indexing on Large Genome Sequences
Suffix tree is an important data structure for indexing a long sequence (like a genome sequence) or a concatenation of sequences. It finds many applications in practice, especiall...
Swee-Seong Wong, Wing-Kin Sung, Limsoon Wong
OSDI
2000
ACM
13 years 10 months ago
Latency Management in Storage Systems
Storage Latency Estimation Descriptors, or SLEDs, are an API that allow applications to understand and take advantage of the dynamic state of a storage system. By accessing data i...
Rodney Van Meter, Minxi Gao
HICSS
2005
IEEE
145views Biometrics» more  HICSS 2005»
14 years 2 months ago
Towards a Reliable and Efficient Distributed Storage System
This paper presents RDSS, a Resource Area Network (RAN)-based Distributed Storage System, which is designed for high scalability, long-term reliability, and operational efficiency...
Xiaodong Li, Chang Liu
SIGIR
2005
ACM
14 years 2 months ago
Controlling overlap in content-oriented XML retrieval
The direct application of standard ranking techniques to retrieve individual elements from a collection of XML documents often produces a result set in which the top ranks are dom...
Charles L. A. Clarke
SIGMOD
2011
ACM
150views Database» more  SIGMOD 2011»
12 years 11 months ago
WHAM: a high-throughput sequence alignment method
Over the last decade the cost of producing genomic sequences has dropped dramatically due to the current so called “next-gen” sequencing methods. However, these next-gen seque...
Yinan Li, Allison Terrell, Jignesh M. Patel