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» Strategies for enhanced annotation of a microarray probe set
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ADC
2008
Springer
100views Database» more  ADC 2008»
13 years 9 months ago
UserMap : an Adaptive Enhancing of User-Driven XML-to-Relational Mapping Strategies
As the XML has become a standard for data representation, it is inevitable to propose and implement techniques for efficient managing of XML data. A natural alternative is to expl...
Irena Mlynkova, Jaroslav Pokorný
BMCBI
2008
122views more  BMCBI 2008»
13 years 7 months ago
Determining gene expression on a single pair of microarrays
Background: In microarray experiments the numbers of replicates are often limited due to factors such as cost, availability of sample or poor hybridization. There are currently fe...
Robert W. Reid, Anthony A. Fodor
BMCBI
2008
113views more  BMCBI 2008»
13 years 7 months ago
A novel application of quantile regression for identification of biomarkers exemplified by equine cartilage microarray data
Background: Identification of biomarkers among thousands of genes arrayed for disease classification has been the subject of considerable research in recent years. These studies h...
Liping Huang, Wenying Zhu, Christopher P. Saunders...
BMCBI
2006
171views more  BMCBI 2006»
13 years 7 months ago
The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies
Background: Intensity values measured by Affymetrix microarrays have to be both normalized, to be able to compare different microarrays by removing non-biological variation, and s...
Roel G. W. Verhaak, Frank J. T. Staal, Peter J. M....
ISBRA
2009
Springer
14 years 2 months ago
Practical Quality Assessment of Microarray Data by Simulation of Differential Gene Expression
There are many methods for assessing the quality of microarray data, but little guidance regarding what to do when defective data is identified. Depending on the scientific questio...
Brian E. Howard, Beate Sick, Steffen Heber