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» String Noninclusion Optimization Problems
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SPIRE
2009
Springer
14 years 5 months ago
Consensus Optimizing Both Distance Sum and Radius
The consensus string problem is finding a representative string (consensus) of a given set S of strings. In this paper we deal with the consensus string problems optimizing both d...
Amihood Amir, Gad M. Landau, Joong Chae Na, Heejin...
COCOON
2010
Springer
14 years 2 months ago
A Three-String Approach to the Closest String Problem
Given a set of n strings of length L and a radius d, the closest string problem (CSP for short) asks for a string tsol that is within a Hamming distance of d to each of the given ...
Zhi-Zhong Chen, Bin Ma, Lusheng Wang
GECCO
2006
Springer
282views Optimization» more  GECCO 2006»
14 years 2 months ago
A genetic algorithm for the longest common subsequence problem
A genetic algorithm for the longest common subsequence problem encodes candidate sequences as binary strings that indicate subsequences of the shortest or first string. Its fitnes...
Brenda Hinkemeyer, Bryant A. Julstrom
SPIRE
2010
Springer
13 years 9 months ago
Why Large Closest String Instances Are Easy to Solve in Practice
We initiate the study of the smoothed complexity of the Closest String problem by proposing a semi-random model of Hamming distance. We restrict interest to the optimization versio...
Christina Boucher, Kathleen Wilkie