It is known that universal compression of strings generated by i.i.d. sources over infinite alphabets entails infinite per-symbol redundancy. Continuing previous work [1], we cons...
A number of biological applications require comparison of large genome strings. Current techniques suffer from both disk I/O and computational cost because of extensive memory req...
In this paper we address the problem of defining a measure of diversity for a population of individuals whose genome can be subjected to major reorganizations during the evolution...
In this abstract, we provide an overview of our survey of randomized techniques for exploiting the parallelism in string matching problems. Broadly, the study of string matching fa...
Given two strings, a pattern P of length m and a text T of length n over some alphabet of size , we consider the exact string matching problem, i.e. we want to report all occurren...