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DCC
2003
IEEE
14 years 7 months ago
Performance of universal codes over infinite alphabets
It is known that universal compression of strings generated by i.i.d. sources over infinite alphabets entails infinite per-symbol redundancy. Continuing previous work [1], we cons...
Alon Orlitsky, Narayana P. Santhanam
PSB
2003
13 years 8 months ago
MAP: Searching Large Genome Databases
A number of biological applications require comparison of large genome strings. Current techniques suffer from both disk I/O and computational cost because of extensive memory req...
Tamer Kahveci, Ambuj K. Singh

Publication
141views
12 years 5 months ago
Measures of Diversity for Populations and Distances Between Individuals with Highly Reorganizable Genomes
In this paper we address the problem of defining a measure of diversity for a population of individuals whose genome can be subjected to major reorganizations during the evolution...
Claudio Mattiussi, Markus Waibel, Dario Floreano
IPPS
1998
IEEE
13 years 11 months ago
Randomization in Parallel Stringology
In this abstract, we provide an overview of our survey of randomized techniques for exploiting the parallelism in string matching problems. Broadly, the study of string matching fa...
S. Muthukrishnan
BIRTHDAY
2010
Springer
13 years 10 months ago
From Nondeterministic Suffix Automaton to Lazy Suffix Tree
Given two strings, a pattern P of length m and a text T of length n over some alphabet of size , we consider the exact string matching problem, i.e. we want to report all occurren...
Kimmo Fredriksson