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SIAMCOMP
1998
113views more  SIAMCOMP 1998»
13 years 7 months ago
Two-Dimensional Periodicity in Rectangular Arrays
Abstract. String matching is rich with a variety of algorithmic tools. In contrast, multidimensional matching has had a rather sparse set of techniques. This paper presents a new a...
Amihood Amir, Gary Benson
BIBE
2009
IEEE
102views Bioinformatics» more  BIBE 2009»
13 years 11 months ago
Online Discovery and Refinement of Novel Genes Using GeneScope
We present a novel gene finding and validation tool, called GeneScope, which is capable of finding and validating genes declaratively by autonomously integrating heterogeneous onl...
Hasan M. Jamil, J. Jesmin
STACS
2009
Springer
14 years 2 months ago
A Unified Algorithm for Accelerating Edit-Distance Computation via Text-Compression
The edit distance problem is a classical fundamental problem in computer science in general, and in combinatorial pattern matching in particular. The standard dynamic-programming s...
Danny Hermelin, Gad M. Landau, Shir Landau, Oren W...
GCC
2003
Springer
14 years 26 days ago
Automated Detection of Design Patterns
: Detection of instances of design patterns is useful for the software maintenance. This paper proposes a new framework for the automated detection of instances of design patterns....
Zhixiang Zhang, Qinghua Li
GCB
2000
Springer
99views Biometrics» more  GCB 2000»
13 years 11 months ago
Structure Motif Discovery and Mining the PDB
We describe an algorithm for the automatic discovery of recurring patterns in protein structures. The patterns consist of individual residues having a defined order along the prote...
Inge Jonassen, Ingvar Eidhammer, Darrell Conklin, ...