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BMCBI
2006
134views more  BMCBI 2006»
13 years 7 months ago
A statistical score for assessing the quality of multiple sequence alignments
Background: Multiple sequence alignment is the foundation of many important applications in bioinformatics that aim at detecting functionally important regions, predicting protein...
Virpi Ahola, Tero Aittokallio, Mauno Vihinen, Esa ...
SEMWEB
2009
Springer
14 years 2 months ago
Actively Learning Ontology Matching via User Interaction
Ontology matching plays a key role for semantic interoperability. Many methods have been proposed for automatically finding the alignment between heterogeneous ontologies. However...
Feng Shi, Juanzi Li, Jie Tang, Guo Tong Xie, Hanyu...
BMCBI
2008
138views more  BMCBI 2008»
13 years 7 months ago
Application of nonnegative matrix factorization to improve profile-profile alignment features for fold recognition and remote ho
Background: Nonnegative matrix factorization (NMF) is a feature extraction method that has the property of intuitive part-based representation of the original features. This uniqu...
Inkyung Jung, Jaehyung Lee, Soo-Young Lee, Dongsup...
BMCBI
2008
123views more  BMCBI 2008»
13 years 7 months ago
A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences
Background: The structure of many eukaryotic cell regulatory proteins is highly modular. They are assembled from globular domains, segments of natively disordered polypeptides and...
Claudia Chica, Alberto Labarga, Cathryn M. Gould, ...
KCAP
2003
ACM
14 years 23 days ago
A generic library of problem solving methods for scheduling applications
In this paper we describe a generic library of problemsolving methods (PSMs) for scheduling applications. Although, some attempts have been made in the past at developing librarie...
Dnyanesh G. Rajpathak, Enrico Motta, Zdenek Zdr&aa...