127 search results - page 4 / 26 » Structural Alignment of Pseudoknotted RNA |
WABI
2010
Springer
13 years 5 months ago
2010
Springer
Background: Although many RNA molecules contain pseudoknots, computational prediction of pseudoknotted RNA structure is still in its infancy due to high running time and space con...
JCB
2008
13 years 7 months ago
2008
In this paper, we study k-noncrossing, -canonical RNA pseudoknot structures with minimum arc-length greater or equal to four. Let T OE4 k; .n/ denote the number of these structure...
BIOCOMP
2006
13 years 8 months ago
2006
- In this study, a context-sensitive grammar is suggested to model various forms of RNA secondary structures, especially pseudoknots. Comparing with a conventional context-free gra...
WABI
2005
Springer
14 years 28 days ago
2005
Springer
Abstract Baharak Rastegari and Anne Condon Department of Computer Science, University of British Columbia Abstract. Accurate prediction of pseudoknotted RNA secondary structure is ...
WABI
2010
Springer
13 years 5 months ago
2010
Springer
Abstract. We present three heuristic strategies for folding RNA sequences into secondary structures including kissing hairpin motifs. The new idea is to construct a kissing hairpin...