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    » Structural Alignment of Pseudoknotted RNA
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    AAIM
    2007
    Springer
    145views Algorithms» more  AAIM 2007»
    Improved Approximation Algorithms for Predicting RNA Secondary Structures with Arbitrary Pseudoknots
    14 years 1 months ago
    Improved Approximation Algorithms for Predicting RNA Secondary Structures with Arbitrary Pseudoknots
    Download  digital.cs.usu.edu
    We study three closely related problems motivated by the prediction of RNA secondary structures with arbitrary pseudoknots: the MAXIMUM BASE PAIR STACKINGS problem proposed by Ieon...
    Minghui Jiang
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    WABI
    2007
    Springer
    99views Bioinformatics» more  WABI 2007»
    HFold: RNA Pseudoknotted Secondary Structure Prediction Using Hierarchical Folding
    14 years 1 months ago
    HFold: RNA Pseudoknotted Secondary Structure Prediction Using Hierarchical Folding
    Download  www.stanford.edu
    Hosna Jabbari, Anne Condon, Ana Pop, Cristina Pop,...
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    BIOINFORMATICS
    2008
    126views more  BIOINFORMATICS 2008»
    FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space
    13 years 7 months ago
    FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space
    Download  www.jdl.ac.cn
    Xiang Chen, Simin He, Dongbo Bu, Fa Zhang, Zhiyong...
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    BIOINFORMATICS
    2004
    77views more  BIOINFORMATICS 2004»
    An Iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots
    13 years 7 months ago
    An Iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots
    Download  www.cs.wustl.edu
    Jianhua Ruan, Gary D. Stormo, Weixiong Zhang
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    BIBE
    2006
    IEEE
    132views Bioinformatics» more  BIBE 2006»
    Simplicity in RNA Secondary Structure Alignment: Towards biologically plausible alignments
    14 years 1 months ago
    Simplicity in RNA Secondary Structure Alignment: Towards biologically plausible alignments
    Download  webdocs.cs.ualberta.ca
    Ribonucleic acid (RNA) molecules contain the genetic information that regulates the functions of organisms. Given two different molecules, a preserved function corresponds to a pr...
    Rimon Mikhaiel, Guohui Lin, Eleni Stroulia
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