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BMCBI
2004
196views more  BMCBI 2004»
13 years 8 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
BIRD
2008
Springer
177views Bioinformatics» more  BIRD 2008»
13 years 10 months ago
Fast Structured Motif Search in DNA Sequences
We study the problem of structured motif search in DNA sequences. This is a fundamental task in bioinformatics which contributes to better understanding of genome characteristics a...
Mihail Halachev, Nematollaah Shiri
ISAAC
2005
Springer
129views Algorithms» more  ISAAC 2005»
14 years 2 months ago
SkipTree: A Scalable Range-Queryable Distributed Data Structure for Multidimensional Data
This paper presents the SkipTree, a new balanced, distributed data structure for storing data with multidimensional keys in a peer-topeer network. The SkipTree supports range quer...
Saeed Alaei, Mohammad Toossi, Mohammad Ghodsi
GD
2004
Springer
14 years 2 months ago
Visualisation of Large and Complex Networks Using PolyPlane
This paper discusses a new method for visualisation of large and complex networks in three dimensions. In particular, we focus on visualising the core tree structure of the large a...
Seok-Hee Hong, Tom Murtagh
GLOBECOM
2009
IEEE
14 years 19 days ago
Stochastic Resource Allocation over Fading Multiple Access and Broadcast Channels
In this paper, we consider the optimal rate and power allocation that maximizes a general utility function of average user rates in a fading multiple-access or broadcast channel. B...
Na Gao, Xin Wang