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» Structural Protein Interactions: From Months to Minutes
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WWW
2007
ACM
14 years 9 months ago
SPARQ2L: towards support for subgraph extraction queries in rdf databases
Many applications in analytical domains often have the need to "connect the dots" i.e., query about the structure of data. In bioinformatics for example, it is typical t...
Kemafor Anyanwu, Angela Maduko, Amit P. Sheth
BMCBI
2006
103views more  BMCBI 2006»
13 years 8 months ago
Meta-All: a system for managing metabolic pathway information
Background: Many attempts are being made to understand biological subjects at a systems level. A major resource for these approaches are biological databases, storing manifold inf...
Stephan Weise, Ivo Grosse, Christian Klukas, Dirk ...
BMCBI
2006
249views more  BMCBI 2006»
13 years 8 months ago
Gene functional similarity search tool (GFSST)
Background: With the completion of the genome sequences of human, mouse, and other species and the advent of high throughput functional genomic research technologies such as biomi...
Peisen Zhang, Jinghui Zhang, Huitao Sheng, James J...
BMCBI
2005
127views more  BMCBI 2005»
13 years 8 months ago
Genomes are covered with ubiquitous 11 bp periodic patterns, the "class A flexible patterns"
Background: The genomes of prokaryotes and lower eukaryotes display a very strong 11 bp periodic bias in the distribution of their nucleotides. This bias is present throughout a g...
Etienne Larsabal, Antoine Danchin
BMCBI
2010
154views more  BMCBI 2010»
13 years 8 months ago
An eScience-Bayes strategy for analyzing omics data
Background: The omics fields promise to revolutionize our understanding of biology and biomedicine. However, their potential is compromised by the challenge to analyze the huge da...
Martin Eklund, Ola Spjuth, Jarl E. S. Wikberg