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BMCBI
2004
106views more  BMCBI 2004»
13 years 7 months ago
ESTIMA, a tool for EST management in a multi-project environment
Background: Single-pass, partial sequencing of complementary DNA (cDNA) libraries generates thousands of chromatograms that are processed into high quality expressed sequence tags...
Charu G. Kumar, Richard LeDuc, George Gong, Levan ...
SIGSOFT
2009
ACM
14 years 7 months ago
DebugAdvisor: a recommender system for debugging
In large software development projects, when a programmer is assigned a bug to fix, she typically spends a lot of time searching (in an ad-hoc manner) for instances from the past ...
B. Ashok, Joseph M. Joy, Hongkang Liang, Sriram K....
BMCBI
2004
150views more  BMCBI 2004»
13 years 7 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
ICWSM
2009
13 years 4 months ago
Targeting Sentiment Expressions through Supervised Ranking of Linguistic Configurations
User generated content is extremely valuable for mining market intelligence because it is unsolicited. We study the problem of analyzing users' sentiment and opinion in their...
Jason S. Kessler, Nicolas Nicolov
BMCBI
2005
123views more  BMCBI 2005»
13 years 7 months ago
PSI-BLAST-ISS: an intermediate sequence search tool for estimation of the position-specific alignment reliability
Background: Protein sequence alignments have become indispensable for virtually any evolutionary, structural or functional study involving proteins. Modern sequence search and com...
Mindaugas Margelevicius, Ceslovas Venclovas